Selected:
SulfoSys (Project)
Description: Silicon cell model for the central carbohydrate metabolism of the archaeon Sulfolobus solfataricus under temperature...
SEEK ID: https://demo.fairdomhub.org/projects/11
Description: Silicon cell model for the central carbohydrate metabolism of the archaeon Sulfolobus solfataricus under temperature...
SEEK ID: https://demo.fairdomhub.org/projects/11
- SysMO
- BaCell-SysMO
- COSMIC
- SUMO
- KOSMOBAC
- SysMO-LAB
- PSYSMO
- SCaRAB
- MOSES
- TRANSLUCENT
- STREAM
- SulfoSys
- Central Carbon Metabolism of Sulfolobus solfataricus
- Carbon loss at high T
- Reconstituted system reference state
- Model reconstituted system
- Metabolite concentrations during reconstituted enzyme incubation
- Model simulation and Exp data for reconstituted system
- Mathematical model for the combined four enzyme system
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- Model gluconeogenesis
- Hidden item
- PGK
- PGK kinetics 3PG
- PGK kinetics ADP
- PGK kinetics ATP
- PGK kinetics BPG
- Model simulation and experimental data for ADP, ATP, 3PG and BPG saturation of PGK
- Expression of S. solfataricus enzymes in E. coli (SOP_SSO_080913a)
- Preparation of cell free extract of recombinant E. coli
- Protein purification from E. coli extracts.
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- GAPDH
- TPI
- TPI kinetics DHAP
- TPI kinetics GAP
- TPI kinetics PEP inhibition GAP
- TPI kinetics PEP inhibition of DHAP
- Model simulation and exp data for TIM kinetics, GAP and DHAP saturation, and PEP inhibition.
- Expression of S. solfataricus enzymes in E. coli (SOP_SSO_080913a)
- Preparation of cell free extract of recombinant E. coli
- Protein purification from E. coli extracts.
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- FBPA/ase
- FBPA/ase kinetics DHAP
- FBPA/ase kinetics GAP
- Model simulation and experimental data for DHAP and GAP saturation of FBPA/ase
- Expression of S. solfataricus enzymes in E. coli (SOP_SSO_080913a)
- Preparation of cell free extract of recombinant E. coli
- Protein purification from E. coli extracts.
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- Experimental assays of the temperature dependent degradation of GAP and DHAP
- Modelling temperature dependent degradation of GAP and DHAP
- Model simulation and Exp data for GAP T deg
- T degradation GAP
- T degradation DHAP
- Model simulation and Exp data for DHAP T deg
- GAP T degradation
- DHAP T degradation
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- FBPAase model
- FBPA/ase kinetics DHAP
- FBPA/ase kinetics GAP
- Model simulation and experimental data for DHAP and GAP saturation of FBPA/ase
- FBPAase kinetic model
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- PGK modeling
- Model simulation and experimental data for ADP, ATP, 3PG and BPG saturation of PGK
- PGK kinetics 3PG
- PGK kinetics ADP
- PGK kinetics ATP
- PGK kinetics BPG
- Hidden item
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- GAPDH modeling
- TPI modeling
- TPI kinetics DHAP
- TPI kinetics GAP
- TPI kinetics PEP inhibition GAP
- TPI kinetics PEP inhibition of DHAP
- Model simulation and exp data for TIM kinetics, GAP and DHAP saturation, and PEP inhibition.
- TIM kinetic model
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- Gluconeogenic model
- Pathway optimisation
- Modelling pathway optimisation
- PGK titration of reconstituted system
- FBPAase titration of reconstituted system
- Model simulation and experimental data for PGK and FBPAase titrations
- Pathway efficiency for 3PG to F6P conversion as function of PGK or FBPAase concentration
- Mathematical model for the combined four enzyme system
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- PGK and FBPAase titrations
- Model simulation and experimental data for PGK and FBPAase titrations
- PGK titration of reconstituted system
- FBPAase titration of reconstituted system
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- Modelling pathway optimisation
- Carbon loss at high T
- Intermediate instability at high temperature leads to low pathway efficiency for an in vitro reconstituted system of gluconeogenesis in Sulfolobus solfataricus
- Central Carbon Metabolism of Sulfolobus solfataricus
- SysMO DB
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