Studies

8 Studies visible to you, out of a total of 27

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The moth study

SysMO DB

Studying moths

Person responsible: Guest

Snapshots: No snapshots

Investigation: The moth investigation

Assays: Bupalus

Scales: Not specified

Created: 5th Jun 2015 at 11:05, Last updated: 13th Jan 2016 at 15:08

Pathway optimisation

SulfoSys

By varying the input or output flux via PGK and FBPAase manipulation respectively the pathway efficiency can be optimised.

Person responsible: Jacky Snoep

Snapshots: No snapshots

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Assays: Modelling pathway optimisation, PGK and FBPAase titrations

Scales: Not specified

Created: 3rd Feb 2013 at 10:53, Last updated: 28th May 2015 at 10:50

Model gluconeogenesis

SulfoSys

Mathematical model of a subset of reactions comprising the three most temperature sensitive intermediates of the gluconeogenic pathway in S. solfataricus

Person responsible: Jacky Snoep

Snapshots: No snapshots

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Assays: Experimental assays of the temperature dependent degradation of GAP and ..., FBPA/ase, FBPAase model, GAPDH, GAPDH modeling, Gluconeogenic model, Modelling temperature dependent degradation of GAP and DHAP, PGK, PGK modeling, TPI, TPI modeling

Scales: Not specified

Created: 29th Jan 2013 at 15:16, Last updated: 28th May 2015 at 10:50

Carbon loss at high T

SulfoSys

No description specified

Person responsible: Jacky Snoep

Snapshots: No snapshots

Investigation: Central Carbon Metabolism of Sulfolobus solfata...

Assays: Model reconstituted system, Reconstituted system reference state

Scales: Not specified

Created: 29th Jan 2013 at 15:11, Last updated: 28th May 2015 at 10:50

Glycerol Synthesis Pathway

SysMO DB

This is a study of the glycerol synthesis pathway, using model predictions and experimental measurements

Person responsible: Katy Wolstencroft

Snapshots: No snapshots

Investigation: Glycerol Synthesis in Saccharomyces cerevisiae

Assays: Extracellular Glycerol, Glycerol Synthesis Model construction, Intracellular Metabolites

Scales: Not specified

Created: 19th Aug 2011 at 11:35, Last updated: 4th Nov 2011 at 11:06

The effects of Redox Charge on Glycolytic Flux

SysMO DB

A study which combines mathematical modelling and experimental measurements to determine the effects of redox charge on glycolytic flux

Person responsible: Jacky Snoep

Snapshots: No snapshots

Investigation: Glycolitic Flux in Lactococcus lactis

Assays: NAD+ and NADH Kinetics, using 13C NMR, Time dependent responses of glycolytic intermediates in a detailed glyco...

Scales: Not specified

Created: 8th Aug 2011 at 15:50, Last updated: 4th Nov 2011 at 11:06

Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry

SysMO DB

This study examines whether the in vivo behavior of yeast glycolysis can be understood in terms of the in vitro kinetic properties of the constituent enzymes.

Person responsible: Jacky Snoep

Snapshots: No snapshots

Investigation: Growth control of the eukaryote cell: a systems...

Assays: Glycolysis in Saccharomyces cerevisiae

Scales: Not specified

Created: 5th Jul 2010 at 16:27, Last updated: 4th Nov 2011 at 11:06

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