Special guest appearance from Charles Darwin himself!
SEEK ID: https://demo.fairdomhub.org/people/320
Locations: United Kingdom , Spain , Germany
ORCID: Not specified
Joined: 23rd Sep 2009
Expertise: Transcriptomics, Proteomics, Microarray
Tools: Molecular Biology, Transcriptomics, Fermentation
Related items
- Programmes (1)
- Projects (4)
- Institutions (4)
- Investigations (5+18)
- Studies (4+16)
- Assays (7+20)
- Strains (0+1)
- Data files (11+26)
- Models (1+2)
- SOPs (0+1)
- Publications (8)
- Events (0+1)
- Documents (0+6)
- Sample types (0+1)
- Samples (0+1)
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO is to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB
Web page: http://sysmo.net/
This project contains materials for "Model management and result reproducibility" training at Managing Big Data tutorial on 5th of December 2016 in Potsdam.
The course will also explain how to build an effective Data Management strategy, needed if you apply for funds for a project. The target group of this basic course are young scientists. This one day tutorial will give you insights in standard operation procedures (SOPs), experimental design, modelling design and a short introduction in SEEK. ...
Programme: This Project is not associated with a Programme
Public web page: http://sb-sciencemanagement.com/training/training/managing-big-data
The main objectives of SysMO-DB are to: facilitate the web-based exchange of data between research groups within- and inter- consortia, and to provide an integrated platform for the dissemination of the results of the SysMO projects to the scientific community. We aim to devise a progressive and scalable solution to the data management needs of the SysMO initiative, that:
- facilitates and maximises the potential for data exchange between SysMO research groups;
- maximises the ‘shelf life’ and ...
Programme: SysMO
Public web page: http://www.sysmo-db.org/
Organisms: Saccharomyces cerevisiae, Lactic Acid Bacteria
Test investigation description
Snapshots: No snapshots
Describet here is the ivnestigation
Submitter: Guest
Studies: This is the study of the investigation of today
Assays: This is the first assay of the study of the investigation of today
Snapshots: No snapshots
The project aimed to build a virtual tomato fruit that enables the prediction of metabolite levels given genetic and environmental inputs, by an iterative process between laboratories which combine expertise in fruit biology, ecophysiology, theoretical and experimental biochemistry, and biotechnology.
Snapshots: No snapshots
Snapshots: No snapshots
Investigating moths
Snapshots: Snapshot 1, Snapshot 2, Snapshot 3
Test study
Snapshots: Snapshot 1
It also is described, but as a study
Submitter: Guest
Investigation: An Investigation Today
Assays: This is the first assay of the study of the investigation of today
Snapshots: No snapshots
About 580 tomato plants were grown in a greenhouse in the southwest of France (Sainte-Livrade sur Lot) during the summer of 2010 according to usual production practices.
Snapshots: No snapshots
Studying moths
Snapshots: Snapshot 1
Glycolysis in Saccharomyces cerevisiae
Submitter: Guest
Biological problem addressed: Metabolism
Investigation: Growth control of the eukaryote cell: a systems...
Organisms: Saccharomyces cerevisiae
Models: Teusink and 1 hidden item
SOPs: No SOPs
Data files: No Data files
Snapshots: No snapshots
Assay for transcriptional profiling time course in yeast
Submitter: Guest
Assay type: Transcriptomics
Technology type: Microarray
Investigation: Methods for interrelating 'omics data
Study: 1 hidden item
Organisms: No organisms
SOPs: No SOPs
Data files: 2 hidden items
Snapshots: No snapshots
Find some moths
Submitter: Guest
Biological problem addressed: Model Analysis Type
Investigation: The moth investigation
Study: The moth study
Organisms: No organisms
Models: No Models
SOPs: No SOPs
Data files: Moth data
Snapshots: No snapshots
Submitter: Guest
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Frim
Study: Frim1
Organisms: No organisms
SOPs: No SOPs
Data files: Frim1 - datapackage and 1 hidden item
Snapshots: No snapshots
It also has a description
Submitter: Guest
Assay type: Transcriptomics
Technology type: Rna-seq
Investigation: An Investigation Today
Organisms: No organisms
SOPs: 2 hidden items
Data files: No Data files
Snapshots: No snapshots
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Abstract (Expand)
Authors: H. Loeffler-Wirth, M. Vogel, T. Kirsten, F. Glock, T. Poulain, A. Korner, M. Loeffler, W. Kiess, H. Binder
Date Published: 14th Sep 2018
Publication Type: Not specified
PubMed ID: 30212520
Citation: PLoS One. 2018 Sep 13;13(9):e0203628. doi: 10.1371/journal.pone.0203628. eCollection 2018.
Abstract (Expand)
Authors: F. A. Meineke, M. Lobe, S. Staubert
Date Published: 22nd Apr 2018
Publication Type: Not specified
PubMed ID: 29677996
Citation: Stud Health Technol Inform. 2018;247:426-430.
Abstract
Authors: Michiel Van Bel, Tim Diels, Emmelien Vancaester, Lukasz Kreft, Alexander Botzki, Yves Van de Peer, Frederik Coppens, Klaas Vandepoele
Date Published: 4th Jan 2018
Publication Type: Tech report
DOI: 10.1093/nar/gkx1002
Citation: Nucleic Acids Research 46(D1):D1190-D1196
Abstract (Expand)
Authors: E. K. Allen, Firstname Lastname, J. O. Hendley, S. D. Turner, B. Winther, M. M. Sale
Date Published: 25th Jun 2014
Publication Type: Not specified
PubMed ID: 25028608
Citation:
Abstract
Authors: Saminda Abeyruwan, Uma D Vempati, Hande Küçük-McGinty, Ubbo Visser, Amar Koleti, Ahsan Mir, Kunie Sakurai, Caty Chung, Joshua A Bittker, Paul A Clemons, Steve Brudz, Anosha Siripala, Arturo J Morales, Martin Romacker, David Twomey, Svetlana Bureeva, Vance Lemmon, Stephan C Schürer
Date Published: 2014
Publication Type: Not specified
DOI: 10.1186/2041-1480-5-S1-S5
Citation: J Biomed Sem 5(Suppl 1) : S5